Topic: Quality filtering NGS data
Discussion leader: Beth
Papers: Dohm et al. 2008
Kircher et al. 2011
Discussion Questions
Software: FastQC
Datasets: Illumina reads 1, Illumina reads 2
Artifacts of random hexamer priming at 5' read ends
Note: Download and install FastQC on your computer. I'll be posting some Illumina read sets for you to quality-check, and we'll discuss the results on Monday. -Christina
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